CDS

Accession Number TCMCG050C54675
gbkey CDS
Protein Id KAG6789895.1
Location join(30156229..30156351,30156427..30156513,30156603..30156770,30156883..30156900,30156986..30157161,30157936..30158050,30158739..30158768,30159388..30159616,30159809..30159987,30160080..30160295,30160454..30160558,30160653..30160760,30160848..30161059,30161205..30161297,30161730..30161857,30162564..30162678,30162798..30162927,30163087..30163296,30164299..30164364,30164448..30164656,30164882..30165083,30165479..30165648,30165890..30166214,30167153..30167278,30167359..30167411,30168226..30168376,30168478..30168540,30168612..30168745,30168861..30168989,30169120..30169159)
Organism Populus tomentosa
locus_tag POTOM_006027

Protein

Length 1369aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA613008, BioSample:SAMN14390005
db_source JAAWWB010000002.1
Definition hypothetical protein POTOM_006027 [Populus tomentosa]
Locus_tag POTOM_006027

EGGNOG-MAPPER Annotation

COG_category L
Description DNA repair protein RAD50
KEGG_TC -
KEGG_Module M00291        [VIEW IN KEGG]
M00292        [VIEW IN KEGG]
M00295        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10866        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03440        [VIEW IN KEGG]
ko03450        [VIEW IN KEGG]
ko04218        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map03450        [VIEW IN KEGG]
map04218        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000722        [VIEW IN EMBL-EBI]
GO:0000723        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0000781        [VIEW IN EMBL-EBI]
GO:0000784        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000794        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003691        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004017        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006278        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006312        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007004        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009123        [VIEW IN EMBL-EBI]
GO:0009165        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010833        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016233        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016776        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019205        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030870        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032200        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0035861        [VIEW IN EMBL-EBI]
GO:0042162        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043047        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046940        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050145        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051880        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:0090734        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0098847        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901293        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTACAGTAGACAAGATGCTGATAAAAGGAATCCGGAGCTTCGACCCGGAAAACAAACACGTCATCACCTTCTTAAAGCCTCTTACTCTCATCGTCGGCCCCAACGGCGCTGGAAAAACCACGATAATAGAATGCTTGAAAGTTGCATGCACCGGAGAGTTGCCTCCGAATGCTAGGTCTGGTCACAGTTTCATCCATGACCCTAAGGTTGCCGGTGAAACGGAGACGAAGGGGCAAATTAAGCTGCGGTTTAAGACCGCGGCCGCGAAGGATGTGGTGTGTATTAGGTCATTTCAGTTGACACAAAAGGCTTCGAAAATGGAGTATAAAGCCATCGAGAGTGTGCTTCAAACGATCAATCCACATACTGGAGAGGGTAGTTGTGATGCAAATAAGGTCTGCCTTAGCTATAGATGTGCTGATATGGATCGAGAAATTCCTGCTTTGATGGGTGTCTCGAAGGCCATTCTAGAAAATGTTATATTCGTGCACCAGGATGAAGCTAATTGGCCTCTACAAGATCCTTCCACGTTAAAGAAGAAATTCGATGATATCTTCTCTGCTACTCGATATACAAAAGCCTTGGAGGTCATCAAAAAGCTTCACAAGGATCAAGCTCAAGAGATAAAGACATACAAACTAAAATTAGAGAATCTTCAAACCTTGAAGGATGCTGCATATAAGGCTTCACCTGTAGAATCACAGCCTGTTGTGCTTCGGGAAAGCATTGGTCAAGATCAAGAGAAAACAGAAATTTTAAAAGTCCAAAGTCAGGAGCTAGAAAGTAACCTTCAGAATTTGGATGCAAAAATTCATCATACTGAAGTAACTCTGAAAGATATGAGAAAATTACAGGACCAAATAACAATCAAGACTGCTGAAAGAAGCACTTTGTTCAGGGAGCAGCAGAGGCAGTATGCAGCTCTTGCTGAAGAAAATGAAGACACTGATGAAGAACTACAGGAGTGGAAAACCAAGTTTGATGAAAAGATTGCAAGTTTGGAATCGAATATTTGCAAATTGGAGAGGGAAATGAATGACATGGAGACAAAGGGTTCCTTTCTTAAGCAAAACATTAATGAGTATATCCGAGAGATCAGCAGGCTTCAGACTGAAGCTGAGGCTCATGCATCCTTGAAGAATGAAAGAGATTCCAATATCCAAAAAATGTATACAAGACATAATCTAGGTCCTCTTCCTAATGCCCCATTCAGTGATGATGTTGCTTTGAACCTCACAAATAGATTAAAGTCAAGGTTGGTGGATCTTGATAAGGATCTACAAGATAAAAAGGTACCCCCCCCCCCCCCCCCCCCGATATACCATTCCTTTACCTATACATCAAATGATACTGAAGTTAAGAGAGCAGAGAATTGCTACTGGGATGCCAATGAACGCTGGAAAAATACGGAGGCTCAAAAACAGGCTAAAGTAGAGATAAAGAATAGCATTTTAAATCGCATTACAGAGAAGGAAAGGGAGCACTCTTCCTTTGAAGAACAAATTTCACATGTTAATCTTTCTCACATTGATGAAAAAGAAAAGAACATGCGAATTGAGGTTGAGAGAAAGACAAACCAGCTAGCTGAAAGAGAATTTGAATCACACATTCGACAAAAGCAGAGTGAGCTGTATGGCATAGAGCAACAGATTAAGGTTCTTAATCGAGAAAAAGACATTTTGGCTGGAGATTCTGAGGACAGAGTGAAACTGTCTCTAAAGAAAGTAGAGCTGGAAAACCATAAAAAGAAACATCGAAAAATAATTGATGAATGCAAGGATAAAATCAGAGGAGTGCTAAAAGGGAGGCTTCCTCCAGATAAGGATTTGAAGAAGGAAATTACTCAGACCCTAAGGGCTCTTGGGTTGGAGTTTGATGACTTGAATATGAAATCCCGTGAAGCTGAGAAGGAGGTAAATGTGTTGCAGATGAAAATACAAGAAGTTAATAATAACCTTTCCAAACAACGCAAGGACATGGACTCTAGGAGGAGATTTATTGAATCCAAACTCCAGTCCTTGGATCAACTGTCATTTAGTGTTGATTTATATCTCAAAGCATTGGAGTTGTCCAAGGAGAAAAGAGATGTTCAGAAAAGCAAGTACAATATTGCAGATGGTATGCGGCAGATGTTTGATCCTTTTGAACGAGTTGCCCGTGCTCATCATGTGTGCCCTTGCTGTGAACGCCCTTTCTCTGCTGAAGAGGAAGATGAATTTGTTAAAAAGCAAAGAGTGAAGGCTGCAAGTTCTGCAGAGCATATGAAAGTGTTGTCTATGGAATCTTCAAATGCAGACACTCTTTTTCAGCAGTTGGACAAGCTTCGTATGGTTTATGAAGAATATACCAAAATTGGCAAGGAAACAATTCCTCTTGCTGAGAAAAACTTGAGTGAGCTAACTGAAGAGCTGGAGCAAAAGTCTCAAGCCCATGATGATCTAGTGGATAAGGAGGGCCTCAGAACTCAGACGTGCTCTGTTATTGTGGATTTATTATTCTTTAATGTGTTGGGTGTTTTAGCTCAAACAAAGGCCGAAAAAGACTCAGTTGAGGCCTTGGTGCAACCTGTTGAAACAGCTGATAGGCTTTTCCAAGAAATTCAGACTTGGCAAAAGCAAGTCGATGATTTAGAATACAAGCTTGATTTTAGAGGGCAAGGTGTTAGAACCATGGAAGAAGTGCAGTCAGAGCTAAGTAGTTTGCAAGGCACAAAGGATAATTTGCATAATGAAGTGGAGAAGTTAAGGGATGAGCAAAGGTACATGGAAAATGATTTATCACATATTCAAATTCGGTGGCATGCTCTGCGGGAGGAAAAAGTTACAGCAGCTAATATGTTGCGTGATGTGAAAAAGTCAGAAGAAGAGTTAGAACGTTTGGTGGAGGAAAAACATCAAGTTGAGCTGGAAGAGAAGCATTTGGCAGAGGCTGTTGGTCCTTTGTCTAGGGAGAAAGAAAAATTACAGGGTGAACACAATGAGTTGAAAGGCCAACTTGAGCGGGAATACGAGGAACAAAAAAAACAGTTAGACGACTTTAAACAGGAGGTTGACACACTTGTTAGAATTACATCAAAGATTAGAGAGTATTATAATTTAAAGAAAGGTGAAAGATTGAAAGAAATGCAAGAAAAACTATCTTTATCGGAGTCCCAACTTCAAGGTTGTGATGCTAGGAAGCAGGAAATTTTAGCAGAACTCAATGACAGTAAAAATGCAGTGCGAAGTCAAGATAACCTTAGAAGAAGTATTGAGGACAACTTAAATTACAGGAAAATAAAGGCCGAAGTGGAAGAGCTTACCAGGGAGATTGAATCATTGGAAGAGAGAATACTGAAGATTGGTGGGTTTTCCTCATTTGAAACTGAACTTGCAAAGCTATTACAAGAAAGAGAGAGACTTCTTTCAGAGTTGAACAGGTTCCGTGGAACAATGTCTGTTTACCAGAACAATATTTCGAAGAATAAAATTGATCTTAAACAGGTGCAATACAAAGATATTGATAAGCGATACTTTGATCAGTTAATCCAGCTAAAGACTACTGAAATGGCAAACAAGGACCTGGACAGATACTACAATGCACTTGACAAGGCACTCATGCGCTTCCACACAATGAAAATGGAGGAAATTAATAAAATCATTCGGGAATTGTGGCAACAAACATACAGAGGACAGGATATAGATTATATTAGCATACATTCAGATTCTGAAGGTGCTGGGACTCGTTCTTACAGCTACAAGGTTGTCATGCAGACAGGTGACGCGGAGCTTGAAATGAGAGGAAGGTGTAGTGCTGGTCAGAAGGTCCTTGCTTCACTTATTATTCGGTTGGCTTTAGCCGAGACATTTTGCCTCCACTGTGGAATACTAGCTCTAGATGAACCTACAACAAACCTGGATGGCCCAAATGCTGAGAGTCTTGCTGCAGCTCTCCTTAGAATCATGGAGGATAGAAAGGGCCAGGAGAATTTTCAACTGATTGTAATTACTCATGATGAGCGATTTGCTCAACTTATCGGTCAACGACAGCATGCAGAAAGATACTATCGAGTTGCAAAAGATGATCATCAGCATAGCATAATTGAAGCCCAAGAGATTTTCGACTGA
Protein:  
MSTVDKMLIKGIRSFDPENKHVITFLKPLTLIVGPNGAGKTTIIECLKVACTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAAKDVVCIRSFQLTQKASKMEYKAIESVLQTINPHTGEGSCDANKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKASPVESQPVVLRESIGQDQEKTEILKVQSQELESNLQNLDAKIHHTEVTLKDMRKLQDQITIKTAERSTLFREQQRQYAALAEENEDTDEELQEWKTKFDEKIASLESNICKLEREMNDMETKGSFLKQNINEYIREISRLQTEAEAHASLKNERDSNIQKMYTRHNLGPLPNAPFSDDVALNLTNRLKSRLVDLDKDLQDKKVPPPPPPPIYHSFTYTSNDTEVKRAENCYWDANERWKNTEAQKQAKVEIKNSILNRITEKEREHSSFEEQISHVNLSHIDEKEKNMRIEVERKTNQLAEREFESHIRQKQSELYGIEQQIKVLNREKDILAGDSEDRVKLSLKKVELENHKKKHRKIIDECKDKIRGVLKGRLPPDKDLKKEITQTLRALGLEFDDLNMKSREAEKEVNVLQMKIQEVNNNLSKQRKDMDSRRRFIESKLQSLDQLSFSVDLYLKALELSKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLSMESSNADTLFQQLDKLRMVYEEYTKIGKETIPLAEKNLSELTEELEQKSQAHDDLVDKEGLRTQTCSVIVDLLFFNVLGVLAQTKAEKDSVEALVQPVETADRLFQEIQTWQKQVDDLEYKLDFRGQGVRTMEEVQSELSSLQGTKDNLHNEVEKLRDEQRYMENDLSHIQIRWHALREEKVTAANMLRDVKKSEEELERLVEEKHQVELEEKHLAEAVGPLSREKEKLQGEHNELKGQLEREYEEQKKQLDDFKQEVDTLVRITSKIREYYNLKKGERLKEMQEKLSLSESQLQGCDARKQEILAELNDSKNAVRSQDNLRRSIEDNLNYRKIKAEVEELTREIESLEERILKIGGFSSFETELAKLLQERERLLSELNRFRGTMSVYQNNISKNKIDLKQVQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYKVVMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLHCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVAKDDHQHSIIEAQEIFD